STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB7AZinc finger and BTB domain containing 7A. (529 aa)    
Predicted Functional Partners:
G3VG33_SARHA
Hist_deacetyl domain-containing protein.
    
 0.461
G3VU23_SARHA
Hist_deacetyl domain-containing protein.
    
 0.461
HDAC1
Hist_deacetyl domain-containing protein.
    
 0.461
HDAC2
Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.461
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.438
NR2C1
Nuclear receptor subfamily 2 group C member 1.
    
 0.437
PCBP3
Uncharacterized protein.
    
 
 0.430
TERF2
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 0.427
CHD1
Chromodomain helicase DNA binding protein 1.
   
 0.423
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 0.418
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.