STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL1Spalt like transcription factor 1. (1307 aa)    
Predicted Functional Partners:
NANOG
Homeobox domain-containing protein.
   
 0.752
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.598
POU5F1
POU domain protein.
   
 0.560
LOC100913730
POU domain protein.
   
 0.548
NSD2
Nuclear receptor binding SET domain protein 2.
    
 0.545
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.534
EFNA1
Ephrin A1; Belongs to the ephrin family.
   
  
 0.528
SALL4
Spalt like transcription factor 4.
    
0.515
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.512
RBBP4
WD_REPEATS_REGION domain-containing protein.
   
 0.512
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.