STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPCMLOpioid binding protein/cell adhesion molecule like. (207 aa)    
Predicted Functional Partners:
NEGR1
Ig-like domain-containing protein.
 
 
 
 0.875
SLITRK1
SLIT and NTRK like family member 1.
   
 0.509
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.460
KCNF1
Potassium voltage-gated channel modifier subfamily F member 1; Belongs to the potassium channel family.
   
 
 0.457
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
  
 0.456
KCNH3
Potassium voltage-gated channel subfamily H member 3.
      
 0.438
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
     
 0.426
FGFR3
Fibroblast growth factor receptor.
   
 0.425
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.