STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3WF16_SARHAUncharacterized protein. (5597 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 0.839
ACTN2
Actinin alpha 2.
   
 0.792
NEB
Nebulin.
   
 0.681
MYL1
Myosin light chain 1.
   
 0.644
TRIM63
Tripartite motif containing 63.
   
 
 0.623
WDR18
WD repeat domain 18.
   
 0.603
G3VQ15_SARHA
Uncharacterized protein.
   
 
0.591
G3WE17_SARHA
Uncharacterized protein.
   
 
0.591
TEX10
Testis expressed 10.
   
 0.574
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 0.555
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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