STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3WFM7_SARHAUncharacterized protein. (540 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.594
REEP6
Receptor expression-enhancing protein.
    
 
 0.525
REEP5
Receptor expression-enhancing protein.
   
 
 0.468
MAPT
Microtubule-associated protein.
   
  
 0.466
VTA1
Vesicle trafficking 1.
    
   0.463
GCH1
GTP cyclohydrolase 1.
    
   0.463
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.441
ATN1
Uncharacterized protein.
      
 0.440
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
 0.436
ATL3
Atlastin GTPase 3.
    
 
 0.417
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.