STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DESDesmin; Belongs to the intermediate filament family. (472 aa)    
Predicted Functional Partners:
TCAP
Titin-cap.
   
 
 0.555
CASP7
Caspase 7; Belongs to the peptidase C14A family.
   
 0.516
CASP6
Caspase 6; Belongs to the peptidase C14A family.
   
 0.498
G3VCF6_SARHA
Ig-like domain-containing protein.
   
 0.497
G3VGC7_SARHA
Ig-like domain-containing protein.
   
 0.497
G3VGF7_SARHA
Ig-like domain-containing protein.
   
 0.497
G3VR65_SARHA
Ig-like domain-containing protein.
   
 0.497
G3VH58_SARHA
Uncharacterized protein.
   
 0.496
BANF2
Uncharacterized protein.
   
 0.496
G3VJV4_SARHA
Uncharacterized protein.
    
 0.473
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.