STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCDSarcoglycan delta. (224 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.843
SGCA
Sarcoglycan alpha.
   
 0.828
SGCB
Sarcoglycan beta.
   
 0.808
SGCE
Sarcoglycan epsilon.
   
 0.744
SSPN
Sarcospan.
   
 
 0.704
LOC100930663
Ig-like domain-containing protein.
      
 0.695
FLNC
Filamin C.
   
 
 0.631
SGCG
Uncharacterized protein.
  
  
0.627
UTRN
Utrophin.
    
 0.584
SNTA1
Syntrophin alpha 1.
      
 0.535
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.