STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3WMH3_SARHAUncharacterized protein. (455 aa)    
Predicted Functional Partners:
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.985
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.974
LTA
Lymphotoxin alpha; Belongs to the tumor necrosis factor family.
    
 0.974
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.974
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.968
RNF31
Uncharacterized protein.
    
 0.965
TNFAIP3
TNF alpha induced protein 3.
    
 0.965
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
 0.961
G3VUU5_SARHA
Uncharacterized protein.
    
 0.957
MAP3K7
Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
   
 0.957
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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