STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD6Ankyrin repeat domain 6. (731 aa)    
Predicted Functional Partners:
AXIN1
Axin 1.
   
 0.713
APP
Amyloid beta precursor protein.
    
 0.708
DVL3
Uncharacterized protein.
    
 0.707
PRICKLE2
Prickle planar cell polarity protein 2.
   
 0.604
PRICKLE3
Uncharacterized protein.
   
 0.579
PRICKLE4
Uncharacterized protein.
   
 0.552
PRICKLE1
Prickle planar cell polarity protein 1.
   
 0.538
APLP2
Amyloid beta precursor like protein 2.
    
 0.537
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.509
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.509
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.