STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD7Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.710
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.668
TDRD9
Tudor domain containing 9.
   
 0.653
CDK17
Cyclin dependent kinase 17.
   
 
 0.587
PIWIL4
Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family.
   
 0.576
DND1
DND microRNA-mediated repression inhibitor 1.
   
 
 0.570
G3WFF1_SARHA
Nanos-type domain-containing protein; Belongs to the nanos family.
   
  
 0.564
FKBP6
Peptidylprolyl isomerase.
   
 
 0.558
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.549
NANOS3
Nanos-type domain-containing protein; Belongs to the nanos family.
   
  
 0.545
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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