Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTH | MOCOS | ENSSHAP00000013466 | ENSSHAP00000018635 | Cystathionine gamma-lyase. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.864 |
CTH | MPST | ENSSHAP00000013466 | ENSSHAP00000016442 | Cystathionine gamma-lyase. | Sulfurtransferase. | 0.988 |
CTH | NFS1 | ENSSHAP00000013466 | ENSSHAP00000021970 | Cystathionine gamma-lyase. | Aminotran_5 domain-containing protein. | 0.508 |
CTH | SCLY | ENSSHAP00000013466 | ENSSHAP00000005839 | Cystathionine gamma-lyase. | Selenocysteine lyase. | 0.508 |
CTH | TST | ENSSHAP00000013466 | ENSSHAP00000016356 | Cystathionine gamma-lyase. | Sulfurtransferase. | 0.987 |
CTH | TSTD1 | ENSSHAP00000013466 | ENSSHAP00000018989 | Cystathionine gamma-lyase. | Thiosulfate sulfurtransferase like domain containing 1. | 0.605 |
CTH | TSTD3 | ENSSHAP00000013466 | ENSSHAP00000015206 | Cystathionine gamma-lyase. | Sulfurtransferase. | 0.605 |
FXN | G3WAT2_SARHA | ENSSHAP00000002549 | ENSSHAP00000012537 | Uncharacterized protein. | NifU_N domain-containing protein. | 0.995 |
FXN | MOCOS | ENSSHAP00000002549 | ENSSHAP00000018635 | Uncharacterized protein. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.818 |
FXN | NFS1 | ENSSHAP00000002549 | ENSSHAP00000021970 | Uncharacterized protein. | Aminotran_5 domain-containing protein. | 0.992 |
FXN | NFU1 | ENSSHAP00000002549 | ENSSHAP00000001302 | Uncharacterized protein. | NFU1 iron-sulfur cluster scaffold. | 0.789 |
FXN | SCLY | ENSSHAP00000002549 | ENSSHAP00000005839 | Uncharacterized protein. | Selenocysteine lyase. | 0.975 |
G3WAT2_SARHA | FXN | ENSSHAP00000012537 | ENSSHAP00000002549 | NifU_N domain-containing protein. | Uncharacterized protein. | 0.995 |
G3WAT2_SARHA | MOCOS | ENSSHAP00000012537 | ENSSHAP00000018635 | NifU_N domain-containing protein. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.999 |
G3WAT2_SARHA | MPST | ENSSHAP00000012537 | ENSSHAP00000016442 | NifU_N domain-containing protein. | Sulfurtransferase. | 0.454 |
G3WAT2_SARHA | NFS1 | ENSSHAP00000012537 | ENSSHAP00000021970 | NifU_N domain-containing protein. | Aminotran_5 domain-containing protein. | 0.999 |
G3WAT2_SARHA | NFU1 | ENSSHAP00000012537 | ENSSHAP00000001302 | NifU_N domain-containing protein. | NFU1 iron-sulfur cluster scaffold. | 0.871 |
G3WAT2_SARHA | SCLY | ENSSHAP00000012537 | ENSSHAP00000005839 | NifU_N domain-containing protein. | Selenocysteine lyase. | 0.997 |
G3WAT2_SARHA | TST | ENSSHAP00000012537 | ENSSHAP00000016356 | NifU_N domain-containing protein. | Sulfurtransferase. | 0.454 |
G3WAT2_SARHA | TSTD1 | ENSSHAP00000012537 | ENSSHAP00000018989 | NifU_N domain-containing protein. | Thiosulfate sulfurtransferase like domain containing 1. | 0.738 |
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