STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM6RNA binding motif protein 6. (1137 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 0.747
RBM25
RNA binding motif protein 25.
   
 
 0.688
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 
 0.681
DHX15
DEAH-box helicase 15.
   
 0.624
RBM23
RNA binding motif protein 23.
   
 0.588
RBM39
RNA binding motif protein 39.
   
 0.588
DHX9
DExH-box helicase 9.
   
 0.575
PRPF4B
Pre-mRNA processing factor 4B.
   
 
 0.559
IK
IK cytokine.
    
  0.548
DHX38
DEAH-box helicase 38.
   
 0.546
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.