STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (324 aa)    
Predicted Functional Partners:
HNRNPC
RRM domain-containing protein.
   
 0.958
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.949
RBMX
RRM domain-containing protein.
  
0.938
G3W7H6_SARHA
RBM1CTR domain-containing protein.
   
 0.927
HNRNPA1
Uncharacterized protein.
  
  
 
0.901
SRSF1
Uncharacterized protein.
  
 0.707
G3VIT4_SARHA
Uncharacterized protein.
   
 0.659
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.659
SRSF2
RRM domain-containing protein.
  
0.651
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.621
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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