STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3X312_SARHAUncharacterized protein. (569 aa)    
Predicted Functional Partners:
IFIH1
Interferon induced with helicase C domain 1.
   
 0.601
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.567
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.558
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.516
UBE2N
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.487
LOC100917553
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.487
UBC
Uncharacterized protein.
   
 0.471
UBB
Ubiquitin B.
   
 0.471
G3VJ63_SARHA
Uncharacterized protein.
   
 0.463
EIF2AK2
Uncharacterized protein.
   
 0.433
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.