Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_0220Selenophosphate-dependent tRNA 2-selenouridine synthase; Alternative locus ID: PMIT9201_0895. (346 aa)    
Predicted Functional Partners:
EU95_1692
NADH dehydrogenase-like protein; Alternative locus ID: PMIT9201_0024; water dikinase; Selenide.
 
  
 0.936
EU95_1256
SAM-dependent methyltransferase; Alternative locus ID: PMIT9201_1366.
  
  
 0.715
EU95_1083
Phosphonate ABC transporter phosphate-binding periplasmic component; Alternative locus ID: PMIT9201_1120; TCDB 3.A.1.9.1.
 
     0.680
psb28
Photosystem II 13 kDa protein Psb28 (PsbW); Alternative locus ID: PMIT9201_0896; Belongs to the Psb28 family.
       0.676
EU95_0219
Hypothetical protein; Alternative locus ID: PMIT9201_0894; FIG00940454: hypothetical protein.
       0.652
EU95_1081
Phosphonate ABC transporter permease protein phnE; Alternative locus ID: PMIT9201_1118; TCDB 3.A.1.9.1.
 
     0.611
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
     
 0.601
serS
Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
     
 0.548
EU95_0222
Hypothetical protein; Alternative locus ID: PMIT9201_0897; FIG00941373: hypothetical protein.
       0.514
EU95_0218
Serine-protein kinase RsbW; Alternative locus ID: PMIT9201_0893.
       0.497
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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