STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_0285ATPase; Alternative locus ID: PMIT9201_0960. (262 aa)    
Predicted Functional Partners:
EU95_0284
Alternative locus ID: PMIT9201_0959; chlorophyllide a oxygenase.
       0.630
EU95_0727
Transport system permease protein; Alternative locus ID: PMIT9201_1606; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
  0.542
EU95_0290
ABC transporter; Alternative locus ID: PMIT9201_0965; ATP binding component, possibly iron transporter; Belongs to the ABC transporter superfamily.
  
  
 
0.529
EU95_0574
Phospholipid-lipopolysaccharide ABC transporter; Alternative locus ID: PMIT9201_0539.
  
     0.462
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.