STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpCIndole-3-glycerol phosphate synthase; Alternative locus ID: PMIT9201_0467; Belongs to the TrpC family. (295 aa)    
Predicted Functional Partners:
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 0.999
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
 
 0.999
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
 
 0.999
EU95_0811
Anthranilate synthase; Alternative locus ID: PMIT9201_0634; aminase component.
 0.998
EU95_1812
Anthranilate synthase; Alternative locus ID: PMIT9201_0144; amidotransferase component Para-aminobenzoate synthase, amidotransferase component.
 
 0.998
trpF
Phosphoribosylanthranilate isomerase; Alternative locus ID: PMIT9201_1289; Belongs to the TrpF family.
 
 
 0.997
EU95_1585
Para-aminobenzoate synthase; Alternative locus ID: PMIT9201_1016; aminase component.
 0.992
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Alternative locus ID: PMIT9201_0973.
  
 
 0.818
EU95_0500
23S rRNA methyltransferase; Alternative locus ID: PMIT9201_0465.
       0.801
EU95_0501
Alternative locus ID: PMIT9201_0466; Dihydrolipoamide dehydrogenase.
       0.801
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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