Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_0722Ferric siderophore transport system; Alternative locus ID: PMIT9201_1601; biopolymer transport protein ExbB. (193 aa)    
Predicted Functional Partners:
EU95_0721
Biopolymer transport protein ExbD/TolR; Alternative locus ID: PMIT9201_1600.
 
 0.999
EU95_0723
Hypothetical protein; Alternative locus ID: PMIT9201_1602.
 
 0.988
EU95_0725
TonB-dependent receptor; Alternative locus ID: PMIT9201_1604.
 
 
 0.823
EU95_1181
Lipopolysaccharide ABC transporter; Alternative locus ID: PMIT9201_1218; ATP-binding protein LptB.
  
   
 0.729
EU95_0395
Putative permease; Alternative locus ID: PMIT9201_0360.
  
     0.714
EU95_0462
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
     0.624
EU95_0461
Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.620
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.615
EU95_0005
Outer membrane efflux protein; Alternative locus ID: PMIT9201_1970.
  
   
 0.611
EU95_0458
Outer membrane protein/protective antigen OMA87; Alternative locus ID: PMIT9201_0423.
  
   
 0.578
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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