Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_0747Phytoene dehydrogenase; Alternative locus ID: PMIT9201_1626. (509 aa)    
Predicted Functional Partners:
EU95_1854
Phytoene synthase; Alternative locus ID: PMIT9201_0186.
 
 
 0.967
EU95_1883
Pro-zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.889
EU95_1853
Phytoene desaturase; Alternative locus ID: PMIT9201_0185; pro-zeta-carotene producing.
  
  
 0.855
EU95_1463
Carotenoid cis-trans isomerase; Alternative locus ID: PMIT9201_1466.
  
  
 
0.673
EU95_1706
Protoporphyrin IX Mg-chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.662
EU95_1177
Geranylgeranyl hydrogenase BchP; Alternative locus ID: PMIT9201_1214; Geranylgeranyl reductase.
  
 
 0.623
EU95_1828
Mg-protoporphyrin O-methyltransferase; Alternative locus ID: PMIT9201_0160.
  
    0.558
EU95_0029
Chlorophyll a synthase ChlG; Alternative locus ID: PMIT9201_1671.
  
 
 0.529
EU95_0748
Hypothetical protein; Alternative locus ID: PMIT9201_1627; FIG00941615: hypothetical protein.
       0.524
EU95_1248
Hypothetical protein; Alternative locus ID: PMIT9201_1358; FIG00940124: hypothetical protein.
  
  
  0.516
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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