Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_0875Putative YCII family conserved protein; Alternative locus ID: PMIT9201_0698. (98 aa)    
Predicted Functional Partners:
EU95_0876
Ferredoxin-dependent glutamate synthase; Alternative locus ID: PMIT9201_0699.
       0.854
EU95_0534
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
  0.820
EU95_0676
Hypothetical protein; Alternative locus ID: PMIT9201_1555; FIG00942135: hypothetical protein.
  
     0.716
EU95_1248
Hypothetical protein; Alternative locus ID: PMIT9201_1358; FIG00940124: hypothetical protein.
  
     0.711
EU95_1901
Permeases of the major facilitator; Alternative locus ID: PMIT9201_0233.
  
     0.644
EU95_1881
Hypothetical protein; Alternative locus ID: PMIT9201_0213.
  
    0.619
EU95_0616
Ferredoxin; Alternative locus ID: PMIT9201_0581.
  
     0.615
rpsL
SSU ribosomal protein S12p (S23e); Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
       0.607
EU95_1729
Putative Photosystem II reaction centre T prot; Alternative locus ID: PMIT9201_0061.
  
     0.599
EU95_0441
Hypothetical protein; Alternative locus ID: PMIT9201_0406; FIG00940224: hypothetical protein.
  
     0.598
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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