Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (105 aa)    
Predicted Functional Partners:
EU95_1491
ATP-dependent Clp protease; Alternative locus ID: PMIT9201_1494; ATP-binding subunit ClpC; Negative regulator of proteintic competence clcC/mecB; Belongs to the ClpA/ClpB family.
   
 
 0.765
EU95_1441
ClpB protein; Alternative locus ID: PMIT9201_1332; Belongs to the ClpA/ClpB family.
   
 
 0.756
dapL
L,L-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
       0.730
EU95_1789
Putative ATP-dependent Clp protease ATP-binding subunit ClpB; Alternative locus ID: PMIT9201_0121; Belongs to the ClpA/ClpB family.
   
 
 0.663
EU95_0098
Hypothetical protein; Alternative locus ID: PMIT9201_1794.
  
     0.652
clpP-2
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.638
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
   
 
 0.635
EU95_0589
Hypothetical protein; Alternative locus ID: PMIT9201_0554; FIG137771: hypothetical protein.
  
     0.624
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
    0.617
EU95_0240
Hypothetical protein; Alternative locus ID: PMIT9201_0915; FIG00940912: hypothetical protein.
  
     0.602
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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