STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_0945Small GTP-binding protein domain; Alternative locus ID: PMIT9201_0768. (402 aa)    
Predicted Functional Partners:
EU95_0944
Nicotinate-nucleotide adenylyltransferase bacterial NadD family; Alternative locus ID: PMIT9201_0767; Belongs to the NadD family.
 
    0.853
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.825
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
    0.805
panC/cmk
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
 
 0.765
EU95_0946
Membrane associated SBC domain; Alternative locus ID: PMIT9201_0769.
       0.736
EU95_1179
GTP-binding protein TypA/BipA; Alternative locus ID: PMIT9201_1216.
   
  
 0.613
EU95_1754
Hypothetical protein; Alternative locus ID: PMIT9201_0086; FIG00940131: hypothetical protein.
  
     0.610
EU95_0947
Xaa-Pro aminopeptidase; Alternative locus ID: PMIT9201_0770; Belongs to the peptidase M24B family.
       0.598
EU95_0949
Putative 30S ribosomal protein PSRP-3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.597
EU95_1234
Ribosomal large subunit pseudouridine synthase F; Alternative locus ID: PMIT9201_1910; Belongs to the pseudouridine synthase RsuA family.
  
  
 0.552
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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