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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1027Putative permease; Alternative locus ID: PMIT9201_1749. (262 aa)    
Predicted Functional Partners:
EU95_1583
Uroporphyrinogen-III methyltransferase; Alternative locus ID: PMIT9201_1014; Belongs to the precorrin methyltransferase family.
    
  0.636
EU95_0897
Serine protease; Alternative locus ID: PMIT9201_0720; trypsin family:Chymotrypsin serine protease.
    
 
 0.567
EU95_1909
Putative serine protease; Alternative locus ID: PMIT9201_0241.
    
 
 0.567
pheT
Phenylalanyl-tRNA synthetase beta chain; Alternative locus ID: PMIT9201_0839; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.565
EU95_0819
Sulfur carrier protein adenylyltransferase ThiF; Alternative locus ID: PMIT9201_0642.
  
  
 0.540
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.404
EU95_1417
Putative pterin-4 alpha-carbinolamine dehydratase-like protein; Alternative locus ID: PMIT9201_1308.
  
     0.402
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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