Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_1100DNA ligase; Alternative locus ID: PMIT9201_1137. (249 aa)    
Predicted Functional Partners:
EU95_1099
Hypothetical protein; Alternative locus ID: PMIT9201_1136; FIG00940245: hypothetical protein.
       0.822
EU95_1101
Hypothetical protein; Alternative locus ID: PMIT9201_1138.
       0.822
EU95_1102
Hypothetical protein; Alternative locus ID: PMIT9201_1139; FIG00940796: hypothetical protein.
       0.667
leuS
Leucyl-tRNA synthetase; Alternative locus ID: PMIT9201_0858; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.599
EU95_1690
ATP-dependent DNA helicase UvrD/PcrA; Alternative locus ID: PMIT9201_0022.
  
  
 0.585
panC/cmk
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
  
  
 0.559
EU95_1103
Hypothetical protein; Alternative locus ID: PMIT9201_1140; FIG00942682: hypothetical protein.
       0.552
polA
DNA polymerasee I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.548
EU95_1632
DNA polymerasee III delta subunit; Alternative locus ID: PMIT9201_1063.
  
  
 0.532
dnaX
DNA polymerasee III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
  
 0.518
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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