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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1306Type I restriction-modification system; Alternative locus ID: PMIT9201_1416; specificity subunit S. (391 aa)    
Predicted Functional Partners:
EU95_1307
Type I restriction-modification system; Alternative locus ID: PMIT9201_1417; DNA-methyltransferase subunit M.
 
 
 0.999
EU95_1304
Type I restriction-modification system; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.982
EU95_1303
Putative metal-dependent hydrolase; Alternative locus ID: PMIT9201_1413.
 
     0.807
EU95_1305
Type I restriction-modification system; Alternative locus ID: PMIT9201_1415; specificity subunit S.
 
    
0.787
EU95_1302
Hypothetical protein; Alternative locus ID: PMIT9201_1412.
       0.627
polA
DNA polymerasee I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 
 0.601
EU95_1308
Hypothetical protein; Alternative locus ID: PMIT9201_1418.
       0.527
atpG
ATP synthase B' chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria. Belongs to the ATPase B chain family.
    
 
 0.521
atpF
ATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.521
EU95_1301
Hypothetical protein; Alternative locus ID: PMIT9201_1411; FIG00944299: hypothetical protein.
       0.466
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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