STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1415Putative carboxysome peptide A; Alternative locus ID: PMIT9201_1306. (83 aa)    
Predicted Functional Partners:
EU95_1410
Carboxysome shell protein CsoS1; Alternative locus ID: PMIT9201_1301.
 
 
 
 0.978
EU95_1413
Carboxysome shell protein CsoS2; Alternative locus ID: PMIT9201_1304.
 
     0.958
EU95_1414
Carboxysome shell protein CsoS3; Alternative locus ID: PMIT9201_1305.
 
     0.958
EU95_1417
Putative pterin-4 alpha-carbinolamine dehydratase-like protein; Alternative locus ID: PMIT9201_1308.
 
     0.910
EU95_1412
Ribulose bisphosphate carboxylase small chain; Alternative locus ID: PMIT9201_1303.
 
 
 
 0.871
EU95_1416
Putative carboxysome peptide B; Alternative locus ID: PMIT9201_1307.
 
    
0.790
EU95_1683
Carbohydrate kinase; Alternative locus ID: PMIT9201_0015; FGGY family.
  
     0.703
cbbL
Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.643
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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