STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1606Fatty acid desaturase; Alternative locus ID: PMIT9201_1037; Delta-9 fatty acid desaturase. (312 aa)    
Predicted Functional Partners:
rplI
LSU ribosomal protein L9p; Binds to the 23S rRNA.
 
     0.811
EU95_1604
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.660
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.647
EU95_1859
1-acyl-sn-glycerol-3-phosphate acyltransferase; Alternative locus ID: PMIT9201_0191.
     
 0.576
EU95_1608
Aluminum resistance protein; Alternative locus ID: PMIT9201_1039.
       0.571
EU95_1607
Hypothetical protein; Alternative locus ID: PMIT9201_1038; FIG00940361: hypothetical protein.
       0.559
EU95_1470
Phospholipid/glycerol acyltransferase; Alternative locus ID: PMIT9201_1473.
     
 0.554
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
    0.509
EU95_1610
Glycine dehydrogenase (decarboxylating) (glycine cleavage system P protein); Alternative locus ID: PMIT9201_1041; Belongs to the GcvP family.
       0.492
EU95_1602
Hypothetical protein; Alternative locus ID: PMIT9201_1033; FIG00940627: hypothetical protein.
 
     0.456
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.