Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_1850RuBisCO operon transcriptional regulator; Alternative locus ID: PMIT9201_0182; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
EU95_0958
DNA-directed RNA polymerasee omega subunit; Alternative locus ID: PMIT9201_0781.
  
 
 
 0.860
EU95_0852
DNA-directed RNA polymerasee alpha subunit; Alternative locus ID: PMIT9201_0675.
 
 
 
 0.858
rpoB
DNA-directed RNA polymerasee beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.846
EU95_1747
Global nitrogen regulatory protein; Alternative locus ID: PMIT9201_0079; CRP family of transcriptional regulators.
  
 
 0.756
EU95_2023
Toxin secretion ABC transporter ATP-binding protein; Alternative locus ID: PMIT9201_1972.
  
 
 0.723
EU95_0876
Ferredoxin-dependent glutamate synthase; Alternative locus ID: PMIT9201_0699.
     
 0.714
rpoC2
DNA-directed RNA polymerasee delta (beta'') subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
  
 
 
 0.681
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.655
EU95_1849
Conserved NnrU/NnuR-like membrane enzyme; Alternative locus ID: PMIT9201_0181.
       0.649
rpoC1
DNA-directed RNA polymerasee gamma subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.623
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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