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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1900L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (555 aa)    
Predicted Functional Partners:
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
 0.999
EU95_1808
Quinolinate phosphoribosyltransferase (decarboxylating); Alternative locus ID: PMIT9201_0140; Belongs to the NadC/ModD family.
 
 0.999
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 
   
  0.930
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.916
EU95_1835
Citrate synthase (si); Alternative locus ID: PMIT9201_0167; Belongs to the citrate synthase family.
     
 0.916
argG
Argininosuccinate synthase; Alternative locus ID: PMIT9201_1001; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.915
EU95_1084
Aspartate aminotransferase; Alternative locus ID: PMIT9201_1121.
     
 0.913
EU95_0793
Isocitrate dehydrogenase (NADP); Alternative locus ID: PMIT9201_0615.
     
 0.909
EU95_1631
Aspartokinase; Alternative locus ID: PMIT9201_1062.
     
 0.904
EU95_1901
Permeases of the major facilitator; Alternative locus ID: PMIT9201_0233.
       0.825
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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