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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_1979Hypothetical protein; Alternative locus ID: PMIT9201_0311; FIG00940935: hypothetical protein. (170 aa)    
Predicted Functional Partners:
EU95_1980
Putative Bacterial type II secretion system pr; Alternative locus ID: PMIT9201_0312.
       0.679
EU95_1432
Hypothetical protein; Alternative locus ID: PMIT9201_1323; FIG00940803: hypothetical protein.
  
     0.629
EU95_1978
Hypothetical protein; Alternative locus ID: PMIT9201_0310; FIG00940211: hypothetical protein.
       0.625
EU95_0520
Hypothetical protein; Alternative locus ID: PMIT9201_0485; FIG00940431: hypothetical protein.
  
     0.591
EU95_1265
Putative DNA polymerasee III; Alternative locus ID: PMIT9201_1375; epsilon subunit.
  
     0.572
EU95_0287
Crp-family regulatory protein; Alternative locus ID: PMIT9201_0962.
  
     0.544
EU95_0578
Hypothetical protein; Alternative locus ID: PMIT9201_0543; FIG00941301: hypothetical protein.
  
     0.533
EU95_1534
Hypothetical protein; Alternative locus ID: PMIT9201_1537; FIG00940154: hypothetical protein.
  
     0.512
EU95_1784
Hypothetical protein; Alternative locus ID: PMIT9201_0116; FIG00940496: hypothetical protein.
  
     0.510
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.463
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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