STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EU95_2001Serine phosphatasee RsbU; Alternative locus ID: PMIT9201_0333; regulator of sigma subunit. (447 aa)    
Predicted Functional Partners:
EU95_0218
Serine-protein kinase RsbW; Alternative locus ID: PMIT9201_0893.
 
 0.977
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.823
ftsY
Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
     
 0.775
argH
Argininosuccinate lyase; Alternative locus ID: PMIT9201_0332.
       0.677
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.570
EU95_1640
Serine acetyltransferase; Alternative locus ID: PMIT9201_1071.
    
  0.559
EU95_1999
RNA-binding region RNP-1 (RNA recognition motif); Alternative locus ID: PMIT9201_0331.
       0.526
EU95_0214
Serine--pyruvate aminotransferase; Alternative locus ID: PMIT9201_0889; L-alanine:glyoxylate aminotransferase.
     
  0.504
EU95_1977
Serine--glyoxylate aminotransferase; Alternative locus ID: PMIT9201_0309.
     
  0.504
EU95_1902
Putative Fe-S oxidoreductase; Alternative locus ID: PMIT9201_0234.
      
 0.485
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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