STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_2001Serine phosphatasee RsbU; Alternative locus ID: PMIT9201_0333; regulator of sigma subunit. (447 aa)    
Predicted Functional Partners:
EU95_0218
Serine-protein kinase RsbW; Alternative locus ID: PMIT9201_0893.
 
 0.991
argH
Argininosuccinate lyase; Alternative locus ID: PMIT9201_0332.
       0.679
ftsY
Signal recognition particle receptor protein FtsY (alpha subunit); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.676
EU95_1640
Serine acetyltransferase; Alternative locus ID: PMIT9201_1071.
    
  0.585
EU95_1999
RNA-binding region RNP-1 (RNA recognition motif); Alternative locus ID: PMIT9201_0331.
       0.474
EU95_0243
Hypothetical protein; Alternative locus ID: PMIT9201_0918; Slr0957 homolog.
   
  
 0.442
EU95_0424
Circadian input kinase A; Alternative locus ID: PMIT9201_0389.
 
   
 0.433
EU95_0206
Pyruvate kinase; Alternative locus ID: PMIT9201_0881; Belongs to the pyruvate kinase family.
    
  0.429
EU95_1555
Hypothetical protein; Alternative locus ID: PMIT9201_0986; FIG00940173: hypothetical protein.
 
    0.427
EU95_0809
Signal transduction histidine kinase; Alternative locus ID: PMIT9201_0632.
   
 
 0.426
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.