STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EU95_2014Zinc uptake regulation protein ZUR; Alternative locus ID: PMIT9201_1981; Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
EU95_0876
Ferredoxin-dependent glutamate synthase; Alternative locus ID: PMIT9201_0699.
    
 0.896
EU95_0852
DNA-directed RNA polymerasee alpha subunit; Alternative locus ID: PMIT9201_0675.
   
   0.846
EU95_2015
Zinc ABC transporter; Alternative locus ID: PMIT9201_1982; inner membrane permease protein ZnuB.
  
  
 0.821
rpoB
DNA-directed RNA polymerasee beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.653
EU95_0628
Thioredoxin reductase; Alternative locus ID: PMIT9201_0593.
  
 
 0.652
EU95_0958
DNA-directed RNA polymerasee omega subunit; Alternative locus ID: PMIT9201_0781.
    
   0.643
EU95_0142
Alkyl hydroperoxide reductase subunit C-like protein; Alternative locus ID: PMIT9201_0817.
  
  
 0.624
rpoC1
DNA-directed RNA polymerasee gamma subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.543
rpoC2
DNA-directed RNA polymerasee delta (beta'') subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.
   
   0.543
EU95_1246
ABC transporter; Alternative locus ID: PMIT9201_1356; ATP binding domain, possibly Mn transporter.
  
  
 0.542
Your Current Organism:
Prochlorococcus marinus MIT9201
NCBI taxonomy Id: 93057
Other names: P. marinus str. MIT 9201, Prochlorococcus marinus str. MIT 9201, Prochlorococcus sp. MIT 9201, Prochlorococcus sp. MIT9201
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