Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX08145.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
ABX09009.1
Conserved hypothetical protein.
  
   
 0.802
ABX08622.1
Conserved hypothetical protein.
  
     0.774
ABX08507.1
Hypothetical protein.
  
     0.773
ABX09189.1
Hypothetical protein; Belongs to the OprB family.
  
     0.772
ABX09190.1
Hypothetical protein; Belongs to the OprB family.
  
     0.772
ABX08371.1
Conserved hypothetical protein.
  
     0.771
ABX09635.1
Conserved hypothetical protein.
  
     0.771
ABX08321.1
Conserved hypothetical protein.
  
     0.770
ABX08760.1
Hypothetical protein; Belongs to the OprB family.
  
     0.769
ABX09107.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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