STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecm4COG435 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]. (330 aa)    
Predicted Functional Partners:
ABX08173.1
Hypothetical protein; COG5413 Uncharacterized integral membrane protein [Function unknown].
       0.817
aspA
Putative aspartoacylase; COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
       0.670
ABX08172.1
Hypothetical protein.
       0.646
ABX08294.1
Putative neutral invertase-like protein.
   
    0.412
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.