STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08234.1COG354 Predicted aminomethyltransferase related to GcvT [General function prediction only]. (280 aa)    
Predicted Functional Partners:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
     0.845
ABX08232.1
COG1253 Hemolysins and related proteins containing CBS domains [General function prediction only].
       0.590
ABX08231.1
Probable oxidoreductase; COG673 Predicted dehydrogenases and related proteins [General function prediction only].
       0.534
ABX08063.1
COG316 Uncharacterized conserved protein [Function unknown]; Belongs to the HesB/IscA family.
  
 
 0.424
ABX09046.1
Putative glucose 6-phosphate dehydrogenase effector OpcA; COG3429 Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism].
  
     0.405
ABX08347.1
COG694 Thioredoxin-like proteins and domains [Posttranslational modification, protein turnover, chaperones].
   
  
 0.403
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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