STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08271.1Hypothetical protein; Belongs to the phycobilisome linker protein family. (269 aa)    
Predicted Functional Partners:
cpeB
Phycobilisome protein.
 
 
 0.998
cpeA
Hypothetical protein.
 
 
 0.998
cpeT
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
  
 0.995
cpeS
Phycoerythrin linker protein CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
  
 0.995
ABX08266.1
PBS lyase HEAT-like repeat; COG1413 FOG: HEAT repeat [Energy production and conversion].
  
  
 0.968
glgC
COG448 ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 
 0.912
cpeZ
Hypothetical protein.
     
 0.903
cpeY
Hypothetical protein.
     
 0.903
ABX08272.1
COG2211 Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].
 
     0.807
ABX08270.1
Hypothetical protein.
       0.773
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.