STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08390.1Conserved hypothetical protein. (167 aa)    
Predicted Functional Partners:
cobM
COG2875 Precorrin-4 methylase [Coenzyme metabolism]; Belongs to the precorrin methyltransferase family.
       0.708
lgt
Putative prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.708
petA
Cytochrome f; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
       0.648
petC
Rieske iron-sulfur protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. Belongs to the Rieske iron-sulfur protein family.
       0.644
pgsA
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; COG558 Phosphatidylglycerophosphate synthase [Lipid metabolism]; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.642
ABX08567.1
Hypothetical protein; COG5470 Uncharacterized conserved protein [Function unknown].
  
     0.492
ABX08809.1
Conserved hypothetical protein.
  
     0.474
ABX08605.1
Possible Vng0271c.
   
 
 0.466
mreB
Rod shape determining protein; COG1077 Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning].
   
 
 0.466
ABX08467.1
COG5322 Predicted dehydrogenase [General function prediction only].
  
     0.446
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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