close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08409.1Related to short-chain alcohol dehydrogenases; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. (257 aa)    
Predicted Functional Partners:
ABX09716.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].
  
 
 0.903
ABX08057.1
Conserved hypothetical protein.
  
     0.760
rpl34
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
  
     0.706
ABX08898.1
Conserved hypothetical protein.
  
 
   0.692
ABX09213.1
Conserved hypothetical protein.
  
     0.663
ABX09311.1
Conserved hypothetical protein.
  
     0.663
ftsQ
Cell division septal protein; Essential cell division protein.
  
     0.651
ABX08211.1
Conserved hypothetical protein.
  
     0.648
ABX08994.1
Conserved hypothetical protein.
  
     0.648
ABX08194.1
Conserved hypothetical protein.
  
     0.644
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.