STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08411.1Conserved hypothetical protein. (172 aa)    
Predicted Functional Partners:
ABX08631.1
Conserved hypothetical protein.
  
     0.767
ABX09203.1
Conserved hypothetical protein.
  
     0.758
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
     0.751
ABX08759.1
COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
  
  
 0.746
ABX08252.1
COG1773 Rubredoxin [Energy production and conversion].
  
     0.741
ABX08463.1
Conserved hypothetical protein.
  
     0.737
ABX08000.1
YGGT family, conserved hypothetical integral membrane protein.
 
     0.723
pta
COG857 BioD-like N-terminal domain of phosphotransacetylase [General function prediction only].
       0.723
clpS
Conserved hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
   
 0.713
psbO
Photosystem II manganese-stabilizing protein.
  
     0.711
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.