STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08463.1Conserved hypothetical protein. (295 aa)    
Predicted Functional Partners:
rps1b
30S ribosomal protein S1-like protein B, putative Nbp1; COG1098 Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis].
 
    0.853
psbO
Photosystem II manganese-stabilizing protein.
  
    0.774
ABX08252.1
COG1773 Rubredoxin [Energy production and conversion].
  
    0.774
ABX08631.1
Conserved hypothetical protein.
  
     0.772
ABX08656.1
Conserved hypothetical protein.
  
     0.770
ABX08726.1
Conserved hypothetical protein.
  
     0.769
ABX08045.1
COG4243 Predicted membrane protein [Function unknown].
  
    0.767
ABX09203.1
Conserved hypothetical protein.
  
     0.765
ABX08253.1
Uncharacterized protein plant photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.764
psaL
Photosystem I PsaL protein (subunit XI).
  
     0.764
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.