STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amyAGlycoside hydrolase family 13; COG366 Glycosidases [Carbohydrate transport and metabolism]. (578 aa)    
Predicted Functional Partners:
ABX08605.1
Possible Vng0271c.
   
 0.975
ABX08607.1
COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only].
 
     0.957
glgP
Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.956
glgC
COG448 ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism]; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.947
malQ
COG1640 4-alpha-glucanotransferase [Carbohydrate transport and metabolism].
  
 
 0.947
pgm
COG33 Phosphoglucomutase [Carbohydrate transport and metabolism].
  
 
 0.919
ABX09224.1
Glucose-1-phosphate cytidylyltransferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure an.
     
 0.904
ABX08608.1
COG4240 Predicted kinase [General function prediction only].
 
    0.766
glgX
Putative isoamylase; COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.721
glgA
Putative ADPglucose--glucosyltransferase (GlgA); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.656
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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