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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08621.1ABC transporter, multidrug efflux family; COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]. (583 aa)    
Predicted Functional Partners:
ABX08495.1
Putative multidrug efflux ABC transporter; COG1132 ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].
  
  
 
0.924
salX
Possible ABC transporter, ATP binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].
    
0.894
ABX07989.1
COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].
 
 
  
0.713
ABX08622.1
Conserved hypothetical protein.
 
     0.691
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.574
ABX08620.1
Hypothetical protein.
       0.547
ABX08618.1
Hypothetical protein.
       0.529
ccmA
Putative multidrug efflux ABC transporter; COG1131 ABC-type multidrug transport system, ATPase component [Defense mechanisms].
 
 0.476
trpD
Putative Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.476
glnQ
COG1126 ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].
 
     
0.443
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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