Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABX08746.1COG1450 Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]; Belongs to the bacterial secretin family. (575 aa)    
Predicted Functional Partners:
ABX08748.1
Hypothetical protein.
       0.790
ABX08747.1
COG3166 Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion].
       0.787
ABX08745.1
Hypothetical protein.
       0.773
ABX08752.1
COG4972 Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion].
  
  
 0.750
ABX08749.1
Hypothetical protein.
       0.732
ABX08750.1
Hypothetical protein.
       0.732
ABX08041.1
Possible RND family outer membrane efflux protein; COG1538 Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].
  
  
 0.680
ABX08751.1
Hypothetical protein.
       0.657
ABX08445.1
Hypothetical protein.
  
     0.654
ABX08753.1
COG1459 Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].
 
  
 0.621
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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