STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08865.1Conserved hypothetical protein. (214 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.893
ABX08863.1
Conserved hypothetical protein.
 
     0.830
ABX08092.1
Conserved hypothetical protein.
  
     0.774
ABX08002.1
Conserved hypothetical protein.
  
     0.771
ABX09261.1
COG670 Integral membrane protein, interacts with FtsH [General function prediction only]; Belongs to the BI1 family.
  
     0.764
ABX08849.1
Conserved hypothetical protein.
  
     0.757
ABX08211.1
Conserved hypothetical protein.
  
    0.754
ABX08194.1
Conserved hypothetical protein.
  
     0.746
ABX08429.1
Conserved hypothetical protein.
  
     0.743
ABX09311.1
Conserved hypothetical protein.
  
     0.743
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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