STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX08979.1ABC transporter, ATP binding domain, possibly Mn transporter; COG1121 ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]. (265 aa)    
Predicted Functional Partners:
ABX08978.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].
 
 0.998
ABX08980.1
ABC transporter, substrate binding protein, possibly Mn; COG803 ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.996
ABX09456.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].
 
 
 0.949
ABX09453.1
Hypothetical protein.
 
  
 0.889
ABX08977.1
Conserved hypothetical protein.
       0.821
ABX09391.1
Hypothetical protein.
  
 
 0.808
ABX08981.1
Conserved hypothetical protein.
       0.675
ABX09455.1
Ferric uptake regulator family; COG735 Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]; Belongs to the Fur family.
  
  
 0.541
ABX08982.1
Conserved hypothetical protein.
       0.512
trpS
Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.509
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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