Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX09006.1Conserved hypothetical protein. (91 aa)    
Predicted Functional Partners:
ABX08981.1
Conserved hypothetical protein.
  
     0.749
ABX08145.1
Hypothetical protein.
  
     0.743
ABX08371.1
Conserved hypothetical protein.
  
     0.737
ABX09076.1
COG4188 Predicted dienelactone hydrolase [General function prediction only].
  
     0.736
ABX08359.1
Conserved hypothetical protein.
  
     0.731
ABX08622.1
Conserved hypothetical protein.
  
     0.725
ABX08994.1
Conserved hypothetical protein.
  
     0.724
ABX09551.1
Hypothetical protein.
  
     0.721
ABX08902.1
Conserved hypothetical protein.
  
     0.707
ABX08216.1
Conserved hypothetical protein.
  
     0.701
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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