Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX09464.1Hypothetical protein. (557 aa)    
Predicted Functional Partners:
ABX09463.1
Hypothetical protein.
 
     0.913
ABX09670.1
COG3063 Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion].
  
 
 
 0.748
ABX09716.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane].
  
 
 0.656
ABX09450.1
G-protein beta WD-40 repeat-containing protein; COG2319 FOG: WD40 repeat [General function prediction only].
  
 
  0.506
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.499
rpoA
Bacterial RNA polymerase, alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.449
ABX09372.1
Contains TPR repeats; COG5010 Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].
  
     0.435
ABX09465.1
Hypothetical protein.
       0.433
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
  0.432
ABX07956.1
COG652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].
  
 
  0.428
Your Current Organism:
Prochlorococcus marinus MIT9211
NCBI taxonomy Id: 93059
Other names: P. marinus str. MIT 9211, Prochlorococcus marinus str. MIT 9211, Prochlorococcus sp. MIT 9211, Prochlorococcus sp. MIT9211
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