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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV49669.1Flavoprotein; COG426 Uncharacterized flavoproteins [Energy production and conversion]. (600 aa)    
Predicted Functional Partners:
ABV49668.1
Possible reductase; COG431 Predicted flavoprotein [General function prediction only].
     
 0.803
pcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.693
ABV49739.1
Conserved hypothetical protein.
  
     0.689
ABV49694.1
Conserved hypothetical protein.
  
     0.658
ABV49782.1
Conserved hypothetical protein.
  
     0.657
ubiC
4-hydroxybenzoate synthetase (chorismate lyase).
  
     0.657
psaE
Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.639
ABV50367.1
Conserved hypothetical protein.
  
     0.604
ABV50159.1
Conserved hypothetical protein.
  
     0.538
ABV49672.1
Flavoprotein; COG426 Uncharacterized flavoproteins [Energy production and conversion].
 
   
0.483
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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