close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degTPutative pleiotropic regulatory protein; COG399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]; Belongs to the DegT/DnrJ/EryC1 family. (401 aa)    
Predicted Functional Partners:
ABV51067.1
Hypothetical protein.
  
  
 0.979
mviM
Probable oxidoreductase; COG673 Predicted dehydrogenases and related proteins [General function prediction only].
  
 0.805
ABV49925.1
Conserved hypothetical protein.
  
    0.706
ABV51058.1
COG673 Predicted dehydrogenases and related proteins [General function prediction only].
  
  
 0.674
rfbB
COG1088 dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.616
fabI
Enoyl-(acyl-carrier-protein) reductase; COG623 Enoyl-[acyl-carrier-protein].
  
    0.579
manC
COG836 Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.556
ABV51063.1
COG381 UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].
  
  
 0.547
hisB
COG131 Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism].
       0.540
ABV51098.1
COG663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only].
 
  
 0.523
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.