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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABV49950.1COG398 Uncharacterized conserved protein [Function unknown]. (211 aa)    
Predicted Functional Partners:
ABV49906.1
COG2259 Predicted membrane protein [Function unknown].
  
    0.702
ABV49745.1
Possible POLO box duplicated region.
  
     0.674
ABV49951.1
Possible Pollen allergen.
       0.646
ABV50286.1
Conserved hypothetical.
  
     0.561
ABV51310.1
Conserved hypothetical protein.
  
     0.513
cpeS
Phycoerythrin linker protein CpeS-like protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
       0.507
ABV49949.1
Hypothetical protein.
       0.507
dedA
DedA family; COG586 Uncharacterized membrane-associated protein [Function unknown].
  
  
 0.489
ABV51001.1
Conserved hypothetical protein.
  
     0.427
ABV49944.1
Selenide,water dikinase; COG1252 NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].
 
    0.414
Your Current Organism:
Prochlorococcus marinus MIT9215
NCBI taxonomy Id: 93060
Other names: P. marinus str. MIT 9215, Prochlorococcus marinus MIT 9215, Prochlorococcus marinus str. MIT 9215, Prochlorococcus sp. MIT 9215, Prochlorococcus sp. MIT9215
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